Cluster: HRGMv2_1781_CGC59
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1781
- CGC Family ID: CGCFAM_04787
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1781_14 | HRGMv2_1781_14_103 | 112152 | 113138 | - | 3.A.1.2.25 |
| TC | HRGMv2_1781_14 | HRGMv2_1781_14_104 | 113125 | 114147 | - | 3.A.1.2.25 |
| TC | HRGMv2_1781_14 | HRGMv2_1781_14_105 | 114161 | 115663 | - | 3.A.1.2.25 |
| TC | HRGMv2_1781_14 | HRGMv2_1781_14_106 | 115844 | 116800 | - | 3.A.1.2.25 |
| sulfatase | HRGMv2_1781_14 | HRGMv2_1781_14_107 | 117204 | 117731 | + | S1_4 |
| pfam | HRGMv2_1781_14 | HRGMv2_1781_14_108 | 117888 | 118232 | - | GGACT |
| TC | HRGMv2_1781_14 | HRGMv2_1781_14_109 | 118235 | 122011 | - | 9.B.22.1.2 |
| TC | HRGMv2_1781_14 | HRGMv2_1781_14_110 | 122008 | 123741 | - | 1.B.33.2.4 |
| pfam | HRGMv2_1781_14 | HRGMv2_1781_14_111 | 123951 | 124589 | + | PMSR |
| TC | HRGMv2_1781_14 | HRGMv2_1781_14_112 | 124775 | 126118 | + | 9.A.40.2.2 |
| TC | HRGMv2_1781_14 | HRGMv2_1781_14_113 | 126315 | 127547 | + | 2.A.1.5.2 |
| CAZyme | HRGMv2_1781_14 | HRGMv2_1781_14_114 | 127566 | 129575 | + | GH42 |
Gene ID: HRGMv2_1781_14_103
Type: TC
Location: 112152 - 113138 (-)
Type: TC
Location: 112152 - 113138 (-)
Gene ID: HRGMv2_1781_14_104
Type: TC
Location: 113125 - 114147 (-)
Type: TC
Location: 113125 - 114147 (-)
Gene ID: HRGMv2_1781_14_105
Type: TC
Location: 114161 - 115663 (-)
Type: TC
Location: 114161 - 115663 (-)
Gene ID: HRGMv2_1781_14_106
Type: TC
Location: 115844 - 116800 (-)
Type: TC
Location: 115844 - 116800 (-)
Gene ID: HRGMv2_1781_14_107
Type: sulfatase
Location: 117204 - 117731 (+)
Type: sulfatase
Location: 117204 - 117731 (+)
Gene ID: HRGMv2_1781_14_108
Type: pfam
Location: 117888 - 118232 (-)
Type: pfam
Location: 117888 - 118232 (-)
Gene ID: HRGMv2_1781_14_109
Type: TC
Location: 118235 - 122011 (-)
Type: TC
Location: 118235 - 122011 (-)
Gene ID: HRGMv2_1781_14_110
Type: TC
Location: 122008 - 123741 (-)
Type: TC
Location: 122008 - 123741 (-)
Gene ID: HRGMv2_1781_14_111
Type: pfam
Location: 123951 - 124589 (+)
Type: pfam
Location: 123951 - 124589 (+)
Gene ID: HRGMv2_1781_14_112
Type: TC
Location: 124775 - 126118 (+)
Type: TC
Location: 124775 - 126118 (+)
Gene ID: HRGMv2_1781_14_113
Type: TC
Location: 126315 - 127547 (+)
Type: TC
Location: 126315 - 127547 (+)
Gene ID: HRGMv2_1781_14_114
Type: CAZyme
Location: 127566 - 129575 (+)
Type: CAZyme
Location: 127566 - 129575 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella grimontii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.