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Cluster: HRGMv2_1781_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_14 HRGMv2_1781_14_41 41959 42831 + 3.A.1.1.11
TC HRGMv2_1781_14 HRGMv2_1781_14_42 42821 43708 + 3.A.1.1.18
pfam HRGMv2_1781_14 HRGMv2_1781_14_43 43719 44543 + Metallophos | Metallophos_2
TC HRGMv2_1781_14 HRGMv2_1781_14_44 44549 45622 + 3.A.1.1.3
TC HRGMv2_1781_14 HRGMv2_1781_14_45 45615 46925 + 3.A.1.1.3
pfam HRGMv2_1781_14 HRGMv2_1781_14_46 47050 47949 - AP_endonuc_2
pfam HRGMv2_1781_14 HRGMv2_1781_14_47 47974 48858 - AP_endonuc_2
CAZyme HRGMv2_1781_14 HRGMv2_1781_14_48 48900 49913 - GH177
Gene ID: HRGMv2_1781_14_41
Type: TC
Location: 41959 - 42831 (+)
Gene ID: HRGMv2_1781_14_42
Type: TC
Location: 42821 - 43708 (+)
Gene ID: HRGMv2_1781_14_43
Type: pfam
Location: 43719 - 44543 (+)
Gene ID: HRGMv2_1781_14_44
Type: TC
Location: 44549 - 45622 (+)
Gene ID: HRGMv2_1781_14_45
Type: TC
Location: 45615 - 46925 (+)
Gene ID: HRGMv2_1781_14_46
Type: pfam
Location: 47050 - 47949 (-)
Gene ID: HRGMv2_1781_14_47
Type: pfam
Location: 47974 - 48858 (-)
Gene ID: HRGMv2_1781_14_48
Type: CAZyme
Location: 48900 - 49913 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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