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Cluster: HRGMv2_1781_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_11 HRGMv2_1781_11_171 177330 178283 - 9.B.50.1.4
pfam HRGMv2_1781_11 HRGMv2_1781_11_172 178999 179934 + ATP_bind_3
TC HRGMv2_1781_11 HRGMv2_1781_11_173 179978 181366 - 3.A.18.1.1
TC HRGMv2_1781_11 HRGMv2_1781_11_174 181835 182818 - 1.A.35.4.1
TF HRGMv2_1781_11 HRGMv2_1781_11_175 183161 183769 - GerE
TF HRGMv2_1781_11 HRGMv2_1781_11_176 184389 185132 + HTH_DeoR
CAZyme HRGMv2_1781_11 HRGMv2_1781_11_177 185149 186216 + GH109
Gene ID: HRGMv2_1781_11_171
Type: TC
Location: 177330 - 178283 (-)
Gene ID: HRGMv2_1781_11_172
Type: pfam
Location: 178999 - 179934 (+)
Gene ID: HRGMv2_1781_11_173
Type: TC
Location: 179978 - 181366 (-)
Gene ID: HRGMv2_1781_11_174
Type: TC
Location: 181835 - 182818 (-)
Gene ID: HRGMv2_1781_11_175
Type: TF
Location: 183161 - 183769 (-)
Gene ID: HRGMv2_1781_11_176
Type: TF
Location: 184389 - 185132 (+)
Gene ID: HRGMv2_1781_11_177
Type: CAZyme
Location: 185149 - 186216 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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