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Cluster: HRGMv2_1781_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_9 HRGMv2_1781_9_60 61942 62769 - 3.A.1.17.1
TC HRGMv2_1781_9 HRGMv2_1781_9_61 62766 63536 - 3.A.1.17.1
TC HRGMv2_1781_9 HRGMv2_1781_9_62 63545 64507 - 3.A.1.17.1
TF HRGMv2_1781_9 HRGMv2_1781_9_63 64760 65389 + GerE
STP HRGMv2_1781_9 HRGMv2_1781_9_64 65389 66930 + HATPase_c | MASE1
TC HRGMv2_1781_9 HRGMv2_1781_9_65 67015 68316 + 2.A.1.4.4
TC HRGMv2_1781_9 HRGMv2_1781_9_66 68316 69347 + 3.A.1.20.2
TC HRGMv2_1781_9 HRGMv2_1781_9_67 69417 71495 + 3.A.1.20.2
TC HRGMv2_1781_9 HRGMv2_1781_9_68 71507 72553 + 3.A.1.20.2
pfam HRGMv2_1781_9 HRGMv2_1781_9_69 72643 73575 - S-methyl_trans
TC HRGMv2_1781_9 HRGMv2_1781_9_70 73562 74992 - 2.A.3.1.10
CAZyme HRGMv2_1781_9 HRGMv2_1781_9_71 75198 76580 + GH28
TC HRGMv2_1781_9 HRGMv2_1781_9_72 76889 78268 + 2.A.3.5.1
Gene ID: HRGMv2_1781_9_60
Type: TC
Location: 61942 - 62769 (-)
Gene ID: HRGMv2_1781_9_61
Type: TC
Location: 62766 - 63536 (-)
Gene ID: HRGMv2_1781_9_62
Type: TC
Location: 63545 - 64507 (-)
Gene ID: HRGMv2_1781_9_63
Type: TF
Location: 64760 - 65389 (+)
Gene ID: HRGMv2_1781_9_64
Type: STP
Location: 65389 - 66930 (+)
Gene ID: HRGMv2_1781_9_65
Type: TC
Location: 67015 - 68316 (+)
Gene ID: HRGMv2_1781_9_66
Type: TC
Location: 68316 - 69347 (+)
Gene ID: HRGMv2_1781_9_67
Type: TC
Location: 69417 - 71495 (+)
Gene ID: HRGMv2_1781_9_68
Type: TC
Location: 71507 - 72553 (+)
Gene ID: HRGMv2_1781_9_69
Type: pfam
Location: 72643 - 73575 (-)
Gene ID: HRGMv2_1781_9_70
Type: TC
Location: 73562 - 74992 (-)
Gene ID: HRGMv2_1781_9_71
Type: CAZyme
Location: 75198 - 76580 (+)
Gene ID: HRGMv2_1781_9_72
Type: TC
Location: 76889 - 78268 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1781_9_66 vegetarian > omnivore 1.84972 0.03798

🧭 Explore Read Mapping of CGC

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