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Cluster: HRGMv2_1781_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_8 HRGMv2_1781_8_181 189406 190608 + 2.A.1.11.3
pfam HRGMv2_1781_8 HRGMv2_1781_8_182 190850 192538 + Sulfatase | EptA_B_N
TC HRGMv2_1781_8 HRGMv2_1781_8_183 193475 195082 + 3.A.1.5.27
TC HRGMv2_1781_8 HRGMv2_1781_8_184 195190 196209 + 3.A.1.5.39
TC HRGMv2_1781_8 HRGMv2_1781_8_185 196219 197121 + 3.A.1.5.39
TC HRGMv2_1781_8 HRGMv2_1781_8_186 197132 198115 + 3.A.1.5.27
TC HRGMv2_1781_8 HRGMv2_1781_8_187 198112 199125 + 3.A.1.5.27
NULL(UNKNOWN) HRGMv2_1781_8 HRGMv2_1781_8_188 199837 200394 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_1781_8 HRGMv2_1781_8_189 200385 201188 + CbiA
CAZyme HRGMv2_1781_8 HRGMv2_1781_8_190 201209 203320 + GT2
TC HRGMv2_1781_8 HRGMv2_1781_8_191 203317 205719 + 4.D.3.1.6
TC HRGMv2_1781_8 HRGMv2_1781_8_192 205716 209768 + 1.B.55.3.1
pfam HRGMv2_1781_8 HRGMv2_1781_8_193 209771 210244 + Cellsynth_D
CAZyme HRGMv2_1781_8 HRGMv2_1781_8_194 210256 211254 + GH8
Gene ID: HRGMv2_1781_8_181
Type: TC
Location: 189406 - 190608 (+)
Gene ID: HRGMv2_1781_8_182
Type: pfam
Location: 190850 - 192538 (+)
Gene ID: HRGMv2_1781_8_183
Type: TC
Location: 193475 - 195082 (+)
Gene ID: HRGMv2_1781_8_184
Type: TC
Location: 195190 - 196209 (+)
Gene ID: HRGMv2_1781_8_185
Type: TC
Location: 196219 - 197121 (+)
Gene ID: HRGMv2_1781_8_186
Type: TC
Location: 197132 - 198115 (+)
Gene ID: HRGMv2_1781_8_187
Type: TC
Location: 198112 - 199125 (+)
Gene ID: HRGMv2_1781_8_188
Type:
Location: 199837 - 200394 (+)
Gene ID: HRGMv2_1781_8_189
Type: STP
Location: 200385 - 201188 (+)
Gene ID: HRGMv2_1781_8_190
Type: CAZyme
Location: 201209 - 203320 (+)
Gene ID: HRGMv2_1781_8_191
Type: TC
Location: 203317 - 205719 (+)
Gene ID: HRGMv2_1781_8_192
Type: TC
Location: 205716 - 209768 (+)
Gene ID: HRGMv2_1781_8_193
Type: pfam
Location: 209771 - 210244 (+)
Gene ID: HRGMv2_1781_8_194
Type: CAZyme
Location: 210256 - 211254 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1781_8_190 vegetarian > omnivore 1.71765 0.00477
HRGMv2_1781_8_190 vegetarian > vegan 2.52004 0.00557

🧭 Explore Read Mapping of CGC

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