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Cluster: HRGMv2_1781_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1781_8 HRGMv2_1781_8_57 54888 56267 - GH4
TC HRGMv2_1781_8 HRGMv2_1781_8_58 56281 57840 - 4.A.1.1.16
pfam HRGMv2_1781_8 HRGMv2_1781_8_59 58035 59750 - AsmA
TC HRGMv2_1781_8 HRGMv2_1781_8_60 59896 61287 - 2.A.40.4.2
TC HRGMv2_1781_8 HRGMv2_1781_8_61 61575 62777 + 2.A.27.1.1
pfam HRGMv2_1781_8 HRGMv2_1781_8_62 62877 64388 - FGGY_N | FGGY_C
TC HRGMv2_1781_8 HRGMv2_1781_8_63 64410 65261 - 1.A.8.1.1
pfam HRGMv2_1781_8 HRGMv2_1781_8_64 65710 65949 + ZapB
TC HRGMv2_1781_8 HRGMv2_1781_8_65 66100 67089 + 3.A.1.6.1
pfam HRGMv2_1781_8 HRGMv2_1781_8_66 67255 68016 + CDH
TC HRGMv2_1781_8 HRGMv2_1781_8_67 68283 69617 + 2.A.2.3.7
Gene ID: HRGMv2_1781_8_57
Type: CAZyme
Location: 54888 - 56267 (-)
Gene ID: HRGMv2_1781_8_58
Type: TC
Location: 56281 - 57840 (-)
Gene ID: HRGMv2_1781_8_59
Type: pfam
Location: 58035 - 59750 (-)
Gene ID: HRGMv2_1781_8_60
Type: TC
Location: 59896 - 61287 (-)
Gene ID: HRGMv2_1781_8_61
Type: TC
Location: 61575 - 62777 (+)
Gene ID: HRGMv2_1781_8_62
Type: pfam
Location: 62877 - 64388 (-)
Gene ID: HRGMv2_1781_8_63
Type: TC
Location: 64410 - 65261 (-)
Gene ID: HRGMv2_1781_8_64
Type: pfam
Location: 65710 - 65949 (+)
Gene ID: HRGMv2_1781_8_65
Type: TC
Location: 66100 - 67089 (+)
Gene ID: HRGMv2_1781_8_66
Type: pfam
Location: 67255 - 68016 (+)
Gene ID: HRGMv2_1781_8_67
Type: TC
Location: 68283 - 69617 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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