Cluster: HRGMv2_1781_CGC37
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1781
- CGC Family ID: CGCFAM_00435
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_130 | 149490 | 150290 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_131 | 150290 | 151048 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_132 | 151038 | 151523 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_133 | 151516 | 152712 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_134 | 152705 | 153685 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_135 | 153682 | 154278 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_136 | 154275 | 154640 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_137 | 154637 | 155149 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_138 | 155149 | 155571 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_139 | 155592 | 156797 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_140 | 156799 | 158292 | - | 3.A.15.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_141 | 158289 | 160271 | - | 1.B.22.1.1 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_142 | 160272 | 161111 | - | 3.A.15.1.1 |
| CAZyme | HRGMv2_1781_7 | HRGMv2_1781_7_143 | 161465 | 164737 | + | CBM41 | GH13_13 |
| pfam | HRGMv2_1781_7 | HRGMv2_1781_7_144 | 164809 | 165333 | + | T2SSB |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_145 | 165362 | 165739 | - | 8.A.2.1.1 |
| NULL(UNKNOWN) | HRGMv2_1781_7 | HRGMv2_1781_7_146 | 165970 | 166149 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1781_7 | HRGMv2_1781_7_147 | 166312 | 168867 | + | GT51 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_148 | 169142 | 171346 | + | 1.B.14.1.2 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_149 | 171392 | 172189 | + | 3.A.1.14.3 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_150 | 172189 | 173079 | + | 3.A.1.14.3 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_151 | 173076 | 175058 | + | 3.A.1.14.3 |
| pfam | HRGMv2_1781_7 | HRGMv2_1781_7_152 | 175177 | 176457 | - | Aminotran_3 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_153 | 176545 | 178056 | + | 2.A.49.5.5 |
| pfam | HRGMv2_1781_7 | HRGMv2_1781_7_154 | 178138 | 178482 | + | Fe-S_biosyn |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_155 | 178569 | 179192 | - | 1.A.62.2.2 |
| TC | HRGMv2_1781_7 | HRGMv2_1781_7_156 | 179373 | 180173 | - | 3.A.1.13.1 |
Gene ID: HRGMv2_1781_7_130
Type: TC
Location: 149490 - 150290 (-)
Type: TC
Location: 149490 - 150290 (-)
Gene ID: HRGMv2_1781_7_131
Type: TC
Location: 150290 - 151048 (-)
Type: TC
Location: 150290 - 151048 (-)
Gene ID: HRGMv2_1781_7_132
Type: TC
Location: 151038 - 151523 (-)
Type: TC
Location: 151038 - 151523 (-)
Gene ID: HRGMv2_1781_7_133
Type: TC
Location: 151516 - 152712 (-)
Type: TC
Location: 151516 - 152712 (-)
Gene ID: HRGMv2_1781_7_134
Type: TC
Location: 152705 - 153685 (-)
Type: TC
Location: 152705 - 153685 (-)
Gene ID: HRGMv2_1781_7_135
Type: TC
Location: 153682 - 154278 (-)
Type: TC
Location: 153682 - 154278 (-)
Gene ID: HRGMv2_1781_7_136
Type: TC
Location: 154275 - 154640 (-)
Type: TC
Location: 154275 - 154640 (-)
Gene ID: HRGMv2_1781_7_137
Type: TC
Location: 154637 - 155149 (-)
Type: TC
Location: 154637 - 155149 (-)
Gene ID: HRGMv2_1781_7_138
Type: TC
Location: 155149 - 155571 (-)
Type: TC
Location: 155149 - 155571 (-)
Gene ID: HRGMv2_1781_7_139
Type: TC
Location: 155592 - 156797 (-)
Type: TC
Location: 155592 - 156797 (-)
Gene ID: HRGMv2_1781_7_140
Type: TC
Location: 156799 - 158292 (-)
Type: TC
Location: 156799 - 158292 (-)
Gene ID: HRGMv2_1781_7_141
Type: TC
Location: 158289 - 160271 (-)
Type: TC
Location: 158289 - 160271 (-)
Gene ID: HRGMv2_1781_7_142
Type: TC
Location: 160272 - 161111 (-)
Type: TC
Location: 160272 - 161111 (-)
Gene ID: HRGMv2_1781_7_143
Type: CAZyme
Location: 161465 - 164737 (+)
Type: CAZyme
Location: 161465 - 164737 (+)
Gene ID: HRGMv2_1781_7_144
Type: pfam
Location: 164809 - 165333 (+)
Type: pfam
Location: 164809 - 165333 (+)
Gene ID: HRGMv2_1781_7_145
Type: TC
Location: 165362 - 165739 (-)
Type: TC
Location: 165362 - 165739 (-)
Gene ID: HRGMv2_1781_7_146
Type:
Location: 165970 - 166149 (+)
Type:
Location: 165970 - 166149 (+)
Gene ID: HRGMv2_1781_7_147
Type: CAZyme
Location: 166312 - 168867 (+)
Type: CAZyme
Location: 166312 - 168867 (+)
Gene ID: HRGMv2_1781_7_148
Type: TC
Location: 169142 - 171346 (+)
Type: TC
Location: 169142 - 171346 (+)
Gene ID: HRGMv2_1781_7_149
Type: TC
Location: 171392 - 172189 (+)
Type: TC
Location: 171392 - 172189 (+)
Gene ID: HRGMv2_1781_7_150
Type: TC
Location: 172189 - 173079 (+)
Type: TC
Location: 172189 - 173079 (+)
Gene ID: HRGMv2_1781_7_151
Type: TC
Location: 173076 - 175058 (+)
Type: TC
Location: 173076 - 175058 (+)
Gene ID: HRGMv2_1781_7_152
Type: pfam
Location: 175177 - 176457 (-)
Type: pfam
Location: 175177 - 176457 (-)
Gene ID: HRGMv2_1781_7_153
Type: TC
Location: 176545 - 178056 (+)
Type: TC
Location: 176545 - 178056 (+)
Gene ID: HRGMv2_1781_7_154
Type: pfam
Location: 178138 - 178482 (+)
Type: pfam
Location: 178138 - 178482 (+)
Gene ID: HRGMv2_1781_7_155
Type: TC
Location: 178569 - 179192 (-)
Type: TC
Location: 178569 - 179192 (-)
Gene ID: HRGMv2_1781_7_156
Type: TC
Location: 179373 - 180173 (-)
Type: TC
Location: 179373 - 180173 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella grimontii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.