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Cluster: HRGMv2_1781_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_7 HRGMv2_1781_7_111 129967 130326 - 8.A.2.1.3
CAZyme HRGMv2_1781_7 HRGMv2_1781_7_112 130461 132044 + AA1
pfam HRGMv2_1781_7 HRGMv2_1781_7_113 132125 134515 - PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2
STP HRGMv2_1781_7 HRGMv2_1781_7_114 134686 135255 + Pribosyltran
TC HRGMv2_1781_7 HRGMv2_1781_7_115 135306 135968 - 2.A.53.3.8
TC HRGMv2_1781_7 HRGMv2_1781_7_116 136076 137002 + 3.A.1.105.17
TC HRGMv2_1781_7 HRGMv2_1781_7_117 136999 137769 + 3.A.1.105.17
pfam HRGMv2_1781_7 HRGMv2_1781_7_118 137891 138331 + EIIA-man
CAZyme HRGMv2_1781_7 HRGMv2_1781_7_119 138389 139642 + CE4
Gene ID: HRGMv2_1781_7_111
Type: TC
Location: 129967 - 130326 (-)
Gene ID: HRGMv2_1781_7_112
Type: CAZyme
Location: 130461 - 132044 (+)
Gene ID: HRGMv2_1781_7_113
Type: pfam
Location: 132125 - 134515 (-)
Gene ID: HRGMv2_1781_7_114
Type: STP
Location: 134686 - 135255 (+)
Gene ID: HRGMv2_1781_7_115
Type: TC
Location: 135306 - 135968 (-)
Gene ID: HRGMv2_1781_7_116
Type: TC
Location: 136076 - 137002 (+)
Gene ID: HRGMv2_1781_7_117
Type: TC
Location: 136999 - 137769 (+)
Gene ID: HRGMv2_1781_7_118
Type: pfam
Location: 137891 - 138331 (+)
Gene ID: HRGMv2_1781_7_119
Type: CAZyme
Location: 138389 - 139642 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1781_7_111 vegetarian > omnivore 3.00140 0.00744
HRGMv2_1781_7_111 vegetarian > vegan 2.07850 0.04609

🧭 Explore Read Mapping of CGC

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