Cluster: HRGMv2_1781_CGC32
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1781
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1781_6 | HRGMv2_1781_6_144 | 172377 | 173753 | - | GH1 |
| TC | HRGMv2_1781_6 | HRGMv2_1781_6_145 | 173905 | 174945 | - | 8.A.5.1.3 |
| TC | HRGMv2_1781_6 | HRGMv2_1781_6_146 | 175055 | 176161 | - | 2.A.45.2.5 |
Gene ID: HRGMv2_1781_6_144
Type: CAZyme
Location: 172377 - 173753 (-)
Type: CAZyme
Location: 172377 - 173753 (-)
Gene ID: HRGMv2_1781_6_145
Type: TC
Location: 173905 - 174945 (-)
Type: TC
Location: 173905 - 174945 (-)
Gene ID: HRGMv2_1781_6_146
Type: TC
Location: 175055 - 176161 (-)
Type: TC
Location: 175055 - 176161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella grimontii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1781_6_145 | vegan > omnivore | 2.33335 | 0.04004 |
| HRGMv2_1781_6_145 | vegetarian > omnivore | 3.12355 | 0.02860 |