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Cluster: HRGMv2_1781_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1781_4 HRGMv2_1781_4_161 184698 186362 - AA3_2
sulfatase HRGMv2_1781_4 HRGMv2_1781_4_162 186377 187849 - S1_6
STP HRGMv2_1781_4 HRGMv2_1781_4_163 187860 188453 - TetR_N
TC HRGMv2_1781_4 HRGMv2_1781_4_164 188582 190615 + 2.A.15.1.4
TC HRGMv2_1781_4 HRGMv2_1781_4_165 190838 190990 + 1.E.53.1.6
pfam HRGMv2_1781_4 HRGMv2_1781_4_166 191184 191969 - adh_short | KR | adh_short_C2
pfam HRGMv2_1781_4 HRGMv2_1781_4_167 192173 192970 - adh_short | KR | adh_short_C2 | SDR
TC HRGMv2_1781_4 HRGMv2_1781_4_168 193031 194086 - 3.A.1.2.11
TC HRGMv2_1781_4 HRGMv2_1781_4_169 194104 195648 - 3.A.1.2.11
pfam HRGMv2_1781_4 HRGMv2_1781_4_170 195650 196270 - DUF2291
TC HRGMv2_1781_4 HRGMv2_1781_4_171 196314 197249 - 3.A.1.2.11
Gene ID: HRGMv2_1781_4_161
Type: CAZyme
Location: 184698 - 186362 (-)
Gene ID: HRGMv2_1781_4_162
Type: sulfatase
Location: 186377 - 187849 (-)
Gene ID: HRGMv2_1781_4_163
Type: STP
Location: 187860 - 188453 (-)
Gene ID: HRGMv2_1781_4_164
Type: TC
Location: 188582 - 190615 (+)
Gene ID: HRGMv2_1781_4_165
Type: TC
Location: 190838 - 190990 (+)
Gene ID: HRGMv2_1781_4_166
Type: pfam
Location: 191184 - 191969 (-)
Gene ID: HRGMv2_1781_4_167
Type: pfam
Location: 192173 - 192970 (-)
Gene ID: HRGMv2_1781_4_168
Type: TC
Location: 193031 - 194086 (-)
Gene ID: HRGMv2_1781_4_169
Type: TC
Location: 194104 - 195648 (-)
Gene ID: HRGMv2_1781_4_170
Type: pfam
Location: 195650 - 196270 (-)
Gene ID: HRGMv2_1781_4_171
Type: TC
Location: 196314 - 197249 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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