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Cluster: HRGMv2_1781_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_4 HRGMv2_1781_4_106 121067 121843 + 3.A.1.3.29
TC HRGMv2_1781_4 HRGMv2_1781_4_107 121975 122928 + 8.A.5.1.6
TC HRGMv2_1781_4 HRGMv2_1781_4_108 123296 125485 + 1.B.14.1.15
TC HRGMv2_1781_4 HRGMv2_1781_4_109 125627 127003 + 2.A.3.1.1
TC HRGMv2_1781_4 HRGMv2_1781_4_110 127157 128398 + 2.A.1.10.4
pfam HRGMv2_1781_4 HRGMv2_1781_4_111 128415 129443 + AP_endonuc_2
CAZyme HRGMv2_1781_4 HRGMv2_1781_4_112 129440 130591 + GH109
Gene ID: HRGMv2_1781_4_106
Type: TC
Location: 121067 - 121843 (+)
Gene ID: HRGMv2_1781_4_107
Type: TC
Location: 121975 - 122928 (+)
Gene ID: HRGMv2_1781_4_108
Type: TC
Location: 123296 - 125485 (+)
Gene ID: HRGMv2_1781_4_109
Type: TC
Location: 125627 - 127003 (+)
Gene ID: HRGMv2_1781_4_110
Type: TC
Location: 127157 - 128398 (+)
Gene ID: HRGMv2_1781_4_111
Type: pfam
Location: 128415 - 129443 (+)
Gene ID: HRGMv2_1781_4_112
Type: CAZyme
Location: 129440 - 130591 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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