Cluster: HRGMv2_1781_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1781
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1781_4 | HRGMv2_1781_4_63 | 69479 | 70714 | + | 2.A.1.10.4 |
| TC | HRGMv2_1781_4 | HRGMv2_1781_4_64 | 70746 | 71459 | + | 9.B.20.2.2 |
| TF | HRGMv2_1781_4 | HRGMv2_1781_4_65 | 72641 | 73567 | + | Trans_reg_C |
| NULL(UNKNOWN) | HRGMv2_1781_4 | HRGMv2_1781_4_66 | 73560 | 74051 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1781_4 | HRGMv2_1781_4_67 | 74120 | 76096 | - | GH28 |
Gene ID: HRGMv2_1781_4_63
Type: TC
Location: 69479 - 70714 (+)
Type: TC
Location: 69479 - 70714 (+)
Gene ID: HRGMv2_1781_4_64
Type: TC
Location: 70746 - 71459 (+)
Type: TC
Location: 70746 - 71459 (+)
Gene ID: HRGMv2_1781_4_65
Type: TF
Location: 72641 - 73567 (+)
Type: TF
Location: 72641 - 73567 (+)
Gene ID: HRGMv2_1781_4_66
Type:
Location: 73560 - 74051 (+)
Type:
Location: 73560 - 74051 (+)
Gene ID: HRGMv2_1781_4_67
Type: CAZyme
Location: 74120 - 76096 (-)
Type: CAZyme
Location: 74120 - 76096 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella grimontii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.