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Cluster: HRGMv2_1781_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_3 HRGMv2_1781_3_364 380244 381734 - 2.A.1.3.14
STP HRGMv2_1781_3 HRGMv2_1781_3_365 381854 382429 + TetR_N
TC HRGMv2_1781_3 HRGMv2_1781_3_366 382619 384007 + 2.A.1.8.10
TC HRGMv2_1781_3 HRGMv2_1781_3_367 384105 387845 + 5.A.3.1.2
TC HRGMv2_1781_3 HRGMv2_1781_3_368 387842 389386 + 5.A.3.1.2
pfam HRGMv2_1781_3 HRGMv2_1781_3_369 389383 390081 + Nitrate_red_del
TC HRGMv2_1781_3 HRGMv2_1781_3_370 390078 390758 + 5.A.3.1.2
pfam HRGMv2_1781_3 HRGMv2_1781_3_371 390888 391733 - Acetyltransf_2
pfam HRGMv2_1781_3 HRGMv2_1781_3_372 391810 393465 - BPD_transp_1 | BPD_transp_1
TC HRGMv2_1781_3 HRGMv2_1781_3_373 393744 394712 - 3.A.1.20.3
TC HRGMv2_1781_3 HRGMv2_1781_3_374 394709 395410 - 3.A.1.1.16
pfam HRGMv2_1781_3 HRGMv2_1781_3_375 395625 396206 + Flavin_Reduct
TF HRGMv2_1781_3 HRGMv2_1781_3_376 396352 397173 - HTH_AraC
CAZyme HRGMv2_1781_3 HRGMv2_1781_3_377 397377 398948 + GH78
TC HRGMv2_1781_3 HRGMv2_1781_3_378 398975 400357 + 2.A.2.3.3
TC HRGMv2_1781_3 HRGMv2_1781_3_379 400401 401858 + 1.B.3.1.2
Gene ID: HRGMv2_1781_3_364
Type: TC
Location: 380244 - 381734 (-)
Gene ID: HRGMv2_1781_3_365
Type: STP
Location: 381854 - 382429 (+)
Gene ID: HRGMv2_1781_3_366
Type: TC
Location: 382619 - 384007 (+)
Gene ID: HRGMv2_1781_3_367
Type: TC
Location: 384105 - 387845 (+)
Gene ID: HRGMv2_1781_3_368
Type: TC
Location: 387842 - 389386 (+)
Gene ID: HRGMv2_1781_3_369
Type: pfam
Location: 389383 - 390081 (+)
Gene ID: HRGMv2_1781_3_370
Type: TC
Location: 390078 - 390758 (+)
Gene ID: HRGMv2_1781_3_371
Type: pfam
Location: 390888 - 391733 (-)
Gene ID: HRGMv2_1781_3_372
Type: pfam
Location: 391810 - 393465 (-)
Gene ID: HRGMv2_1781_3_373
Type: TC
Location: 393744 - 394712 (-)
Gene ID: HRGMv2_1781_3_374
Type: TC
Location: 394709 - 395410 (-)
Gene ID: HRGMv2_1781_3_375
Type: pfam
Location: 395625 - 396206 (+)
Gene ID: HRGMv2_1781_3_376
Type: TF
Location: 396352 - 397173 (-)
Gene ID: HRGMv2_1781_3_377
Type: CAZyme
Location: 397377 - 398948 (+)
Gene ID: HRGMv2_1781_3_378
Type: TC
Location: 398975 - 400357 (+)
Gene ID: HRGMv2_1781_3_379
Type: TC
Location: 400401 - 401858 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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