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Cluster: HRGMv2_1781_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_3 HRGMv2_1781_3_312 324962 325594 - 2.A.76.1.10
TC HRGMv2_1781_3 HRGMv2_1781_3_313 325748 326212 - 2.A.7.21.5
TC HRGMv2_1781_3 HRGMv2_1781_3_314 326222 326656 - 2.A.7.21.5
TF HRGMv2_1781_3 HRGMv2_1781_3_315 326756 327688 + HTH_1
CAZyme HRGMv2_1781_3 HRGMv2_1781_3_316 327954 330137 + AA2
NULL(UNKNOWN) HRGMv2_1781_3 HRGMv2_1781_3_317 330288 330380 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1781_3 HRGMv2_1781_3_318 330399 333131 - 3.A.3.4.1
TC HRGMv2_1781_3 HRGMv2_1781_3_319 333273 333956 - 9.B.20.1.1
NULL(UNKNOWN) HRGMv2_1781_3 HRGMv2_1781_3_320 334383 334892 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1781_3 HRGMv2_1781_3_321 335181 336590 + 2.A.1.1.115
Gene ID: HRGMv2_1781_3_312
Type: TC
Location: 324962 - 325594 (-)
Gene ID: HRGMv2_1781_3_313
Type: TC
Location: 325748 - 326212 (-)
Gene ID: HRGMv2_1781_3_314
Type: TC
Location: 326222 - 326656 (-)
Gene ID: HRGMv2_1781_3_315
Type: TF
Location: 326756 - 327688 (+)
Gene ID: HRGMv2_1781_3_316
Type: CAZyme
Location: 327954 - 330137 (+)
Gene ID: HRGMv2_1781_3_317
Type:
Location: 330288 - 330380 (-)
Gene ID: HRGMv2_1781_3_318
Type: TC
Location: 330399 - 333131 (-)
Gene ID: HRGMv2_1781_3_319
Type: TC
Location: 333273 - 333956 (-)
Gene ID: HRGMv2_1781_3_320
Type:
Location: 334383 - 334892 (-)
Gene ID: HRGMv2_1781_3_321
Type: TC
Location: 335181 - 336590 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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