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Cluster: HRGMv2_1781_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1781_3 HRGMv2_1781_3_47 41679 42347 + 2.A.95.1.1
TC HRGMv2_1781_3 HRGMv2_1781_3_48 42421 43620 - 2.A.1.2.15
pfam HRGMv2_1781_3 HRGMv2_1781_3_49 43825 44616 + PhzC-PhzF
pfam HRGMv2_1781_3 HRGMv2_1781_3_50 44626 45414 + PhzC-PhzF
TC HRGMv2_1781_3 HRGMv2_1781_3_51 45557 46837 - 2.A.47.4.7
pfam HRGMv2_1781_3 HRGMv2_1781_3_52 46857 47327 - DUF386
CAZyme HRGMv2_1781_3 HRGMv2_1781_3_53 47324 48496 - GH33
TC HRGMv2_1781_3 HRGMv2_1781_3_54 48525 49286 - 2.A.109.2.3
Gene ID: HRGMv2_1781_3_47
Type: TC
Location: 41679 - 42347 (+)
Gene ID: HRGMv2_1781_3_48
Type: TC
Location: 42421 - 43620 (-)
Gene ID: HRGMv2_1781_3_49
Type: pfam
Location: 43825 - 44616 (+)
Gene ID: HRGMv2_1781_3_50
Type: pfam
Location: 44626 - 45414 (+)
Gene ID: HRGMv2_1781_3_51
Type: TC
Location: 45557 - 46837 (-)
Gene ID: HRGMv2_1781_3_52
Type: pfam
Location: 46857 - 47327 (-)
Gene ID: HRGMv2_1781_3_53
Type: CAZyme
Location: 47324 - 48496 (-)
Gene ID: HRGMv2_1781_3_54
Type: TC
Location: 48525 - 49286 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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