Cluster: HRGMv2_1781_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1781
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1781_2 | HRGMv2_1781_2_388 | 400435 | 401574 | - | PL38 |
| TC | HRGMv2_1781_2 | HRGMv2_1781_2_389 | 401582 | 402676 | - | 3.A.1.1.10 |
| TC | HRGMv2_1781_2 | HRGMv2_1781_2_390 | 402687 | 403526 | - | 3.A.1.1.39 |
| TC | HRGMv2_1781_2 | HRGMv2_1781_2_391 | 403536 | 404477 | - | 3.A.1.1.34 |
| STP | HRGMv2_1781_2 | HRGMv2_1781_2_392 | 404489 | 405778 | - | SBP_bac_1 |
| CAZyme | HRGMv2_1781_2 | HRGMv2_1781_2_393 | 406304 | 407542 | + | PL38 |
| CAZyme | HRGMv2_1781_2 | HRGMv2_1781_2_394 | 407542 | 409572 | + | PL17_1 |
Gene ID: HRGMv2_1781_2_388
Type: CAZyme
Location: 400435 - 401574 (-)
Type: CAZyme
Location: 400435 - 401574 (-)
Gene ID: HRGMv2_1781_2_389
Type: TC
Location: 401582 - 402676 (-)
Type: TC
Location: 401582 - 402676 (-)
Gene ID: HRGMv2_1781_2_390
Type: TC
Location: 402687 - 403526 (-)
Type: TC
Location: 402687 - 403526 (-)
Gene ID: HRGMv2_1781_2_391
Type: TC
Location: 403536 - 404477 (-)
Type: TC
Location: 403536 - 404477 (-)
Gene ID: HRGMv2_1781_2_392
Type: STP
Location: 404489 - 405778 (-)
Type: STP
Location: 404489 - 405778 (-)
Gene ID: HRGMv2_1781_2_393
Type: CAZyme
Location: 406304 - 407542 (+)
Type: CAZyme
Location: 406304 - 407542 (+)
Gene ID: HRGMv2_1781_2_394
Type: CAZyme
Location: 407542 - 409572 (+)
Type: CAZyme
Location: 407542 - 409572 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella grimontii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.