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Cluster: HRGMv2_1773_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1773_311 HRGMv2_1773_311_8 6756 8180 - GT20
pfam HRGMv2_1773_311 HRGMv2_1773_311_9 8155 8958 - Trehalose_PPase
TC HRGMv2_1773_311 HRGMv2_1773_311_10 9135 10115 - 3.A.1.2.2
TC HRGMv2_1773_311 HRGMv2_1773_311_11 10130 11644 - 3.A.1.2.2
TC HRGMv2_1773_311 HRGMv2_1773_311_12 11716 12705 - 3.A.1.2.2
pfam HRGMv2_1773_311 HRGMv2_1773_311_13 13495 13998 + Ferritin
TC HRGMv2_1773_311 HRGMv2_1773_311_14 14153 15496 + 2.A.13.1.2
Gene ID: HRGMv2_1773_311_8
Type: CAZyme
Location: 6756 - 8180 (-)
Gene ID: HRGMv2_1773_311_9
Type: pfam
Location: 8155 - 8958 (-)
Gene ID: HRGMv2_1773_311_10
Type: TC
Location: 9135 - 10115 (-)
Gene ID: HRGMv2_1773_311_11
Type: TC
Location: 10130 - 11644 (-)
Gene ID: HRGMv2_1773_311_12
Type: TC
Location: 11716 - 12705 (-)
Gene ID: HRGMv2_1773_311_13
Type: pfam
Location: 13495 - 13998 (+)
Gene ID: HRGMv2_1773_311_14
Type: TC
Location: 14153 - 15496 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1773_311_9 vegetarian > vegan 1.65104 0.03746

🧭 Explore Read Mapping of CGC

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