dbCAN Logo

Cluster: HRGMv2_1773_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1773_310 HRGMv2_1773_310_1 123 2648 + GT51
pfam HRGMv2_1773_310 HRGMv2_1773_310_2 2993 3565 + Fimbrial
pfam HRGMv2_1773_310 HRGMv2_1773_310_3 3608 4321 + PapD_N | PapD_C
TC HRGMv2_1773_310 HRGMv2_1773_310_4 4342 6819 + 1.B.11.3.6
pfam HRGMv2_1773_310 HRGMv2_1773_310_5 6833 7837 + Fimbrial
TC HRGMv2_1773_310 HRGMv2_1773_310_6 8043 10253 + 1.B.14.1.2
TC HRGMv2_1773_310 HRGMv2_1773_310_7 10304 11101 + 3.A.1.14.3
TC HRGMv2_1773_310 HRGMv2_1773_310_8 11101 11991 + 3.A.1.14.3
TC HRGMv2_1773_310 HRGMv2_1773_310_9 11988 13970 + 3.A.1.14.3
Gene ID: HRGMv2_1773_310_1
Type: CAZyme
Location: 123 - 2648 (+)
Gene ID: HRGMv2_1773_310_2
Type: pfam
Location: 2993 - 3565 (+)
Gene ID: HRGMv2_1773_310_3
Type: pfam
Location: 3608 - 4321 (+)
Gene ID: HRGMv2_1773_310_4
Type: TC
Location: 4342 - 6819 (+)
Gene ID: HRGMv2_1773_310_5
Type: pfam
Location: 6833 - 7837 (+)
Gene ID: HRGMv2_1773_310_6
Type: TC
Location: 8043 - 10253 (+)
Gene ID: HRGMv2_1773_310_7
Type: TC
Location: 10304 - 11101 (+)
Gene ID: HRGMv2_1773_310_8
Type: TC
Location: 11101 - 11991 (+)
Gene ID: HRGMv2_1773_310_9
Type: TC
Location: 11988 - 13970 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1773_310_8 vegetarian > omnivore 1.64703 0.01969

🧭 Explore Read Mapping of CGC

← Back to Cluster List