dbCAN Logo

Cluster: HRGMv2_1773_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1773_233 HRGMv2_1773_233_3 1679 2728 - 2.A.21.9.1
pfam HRGMv2_1773_233 HRGMv2_1773_233_4 2898 4307 - Gln-synt_C | Gln-synt_N
sulfatase HRGMv2_1773_233 HRGMv2_1773_233_5 4686 6509 + S1_97
TC HRGMv2_1773_233 HRGMv2_1773_233_6 6560 7303 - 1.B.35.2.2
TC HRGMv2_1773_233 HRGMv2_1773_233_7 7321 8745 - 2.A.2.3.9
TC HRGMv2_1773_233 HRGMv2_1773_233_8 8789 10171 - 2.A.2.3.9
CAZyme HRGMv2_1773_233 HRGMv2_1773_233_9 10217 12241 - GH31_13
Gene ID: HRGMv2_1773_233_3
Type: TC
Location: 1679 - 2728 (-)
Gene ID: HRGMv2_1773_233_4
Type: pfam
Location: 2898 - 4307 (-)
Gene ID: HRGMv2_1773_233_5
Type: sulfatase
Location: 4686 - 6509 (+)
Gene ID: HRGMv2_1773_233_6
Type: TC
Location: 6560 - 7303 (-)
Gene ID: HRGMv2_1773_233_7
Type: TC
Location: 7321 - 8745 (-)
Gene ID: HRGMv2_1773_233_8
Type: TC
Location: 8789 - 10171 (-)
Gene ID: HRGMv2_1773_233_9
Type: CAZyme
Location: 10217 - 12241 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1773_233_6 vegetarian > omnivore 1.36817 0.01969
HRGMv2_1773_233_6 vegetarian > vegan 1.55089 0.03866

🧭 Explore Read Mapping of CGC

← Back to Cluster List