dbCAN HGM

Cluster: HRGMv2_1773_CGC24

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_1773_125	HRGMv2_1773_125_123	117396	119093	+	GH13_18
TC	HRGMv2_1773_125	HRGMv2_1773_125_124	119108	120400	+	3.A.1.1.46
TC	HRGMv2_1773_125	HRGMv2_1773_125_125	120423	121304	+	3.A.1.1.46
TC	HRGMv2_1773_125	HRGMv2_1773_125_126	121291	122133	+	3.A.1.1.46
pfam	HRGMv2_1773_125	HRGMv2_1773_125_127	122163	123215	+	ADH_zinc_N
pfam	HRGMv2_1773_125	HRGMv2_1773_125_128	123233	124021	+	AP_endonuc_2
CAZyme	HRGMv2_1773_125	HRGMv2_1773_125_129	124036	125091	+	GH179
CAZyme	HRGMv2_1773_125	HRGMv2_1773_125_130	125085	127364	+	GH65
pfam	HRGMv2_1773_125	HRGMv2_1773_125_131	127354	128028	+	Hydrolase \| HAD_2
TC	HRGMv2_1773_125	HRGMv2_1773_125_132	128032	129114	+	3.A.1.1.46
TC	HRGMv2_1773_125	HRGMv2_1773_125_133	129181	130095	+	1.B.21.1.1

Gene ID: HRGMv2_1773_125_123
Type: CAZyme
Location: 117396 - 119093 (+)

Gene ID: HRGMv2_1773_125_124
Type: TC
Location: 119108 - 120400 (+)

Gene ID: HRGMv2_1773_125_125
Type: TC
Location: 120423 - 121304 (+)

Gene ID: HRGMv2_1773_125_126
Type: TC
Location: 121291 - 122133 (+)

Gene ID: HRGMv2_1773_125_127
Type: pfam
Location: 122163 - 123215 (+)

Gene ID: HRGMv2_1773_125_128
Type: pfam
Location: 123233 - 124021 (+)

Gene ID: HRGMv2_1773_125_129
Type: CAZyme
Location: 124036 - 125091 (+)

Gene ID: HRGMv2_1773_125_130
Type: CAZyme
Location: 125085 - 127364 (+)

Gene ID: HRGMv2_1773_125_131
Type: pfam
Location: 127354 - 128028 (+)

Gene ID: HRGMv2_1773_125_132
Type: TC
Location: 128032 - 129114 (+)

Gene ID: HRGMv2_1773_125_133
Type: TC
Location: 129181 - 130095 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1773_125_133	vegetarian > omnivore	1.25421	0.01969
HRGMv2_1773_125_133	vegetarian > vegan	1.23935	0.03866