Cluster: HRGMv2_1773_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1773
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1773_68 | HRGMv2_1773_68_9 | 7740 | 10355 | + | GT2 |
| TC | HRGMv2_1773_68 | HRGMv2_1773_68_10 | 10402 | 12786 | + | 4.D.3.1.6 |
| CAZyme | HRGMv2_1773_68 | HRGMv2_1773_68_11 | 12793 | 13899 | + | GH8 |
| TC | HRGMv2_1773_68 | HRGMv2_1773_68_12 | 13881 | 17363 | + | 1.B.55.3.1 |
| STP | HRGMv2_1773_68 | HRGMv2_1773_68_13 | 17483 | 19489 | + | EAL | GGDEF |
| TC | HRGMv2_1773_68 | HRGMv2_1773_68_14 | 19649 | 20935 | + | 2.A.23.1.7 |
Gene ID: HRGMv2_1773_68_9
Type: CAZyme
Location: 7740 - 10355 (+)
Type: CAZyme
Location: 7740 - 10355 (+)
Gene ID: HRGMv2_1773_68_10
Type: TC
Location: 10402 - 12786 (+)
Type: TC
Location: 10402 - 12786 (+)
Gene ID: HRGMv2_1773_68_11
Type: CAZyme
Location: 12793 - 13899 (+)
Type: CAZyme
Location: 12793 - 13899 (+)
Gene ID: HRGMv2_1773_68_12
Type: TC
Location: 13881 - 17363 (+)
Type: TC
Location: 13881 - 17363 (+)
Gene ID: HRGMv2_1773_68_13
Type: STP
Location: 17483 - 19489 (+)
Type: STP
Location: 17483 - 19489 (+)
Gene ID: HRGMv2_1773_68_14
Type: TC
Location: 19649 - 20935 (+)
Type: TC
Location: 19649 - 20935 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter kobei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1773_68_12 | vegetarian > omnivore | 1.14522 | 0.01969 |