dbCAN HGM

Cluster: HRGMv2_1773_CGC10

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1773_49	HRGMv2_1773_49_23	27085	27714	-	5.A.3.3.2
TC	HRGMv2_1773_49	HRGMv2_1773_49_24	27711	30089	-	5.A.3.3.2
CAZyme	HRGMv2_1773_49	HRGMv2_1773_49_25	30178	32505	-	GT51
peptidase	HRGMv2_1773_49	HRGMv2_1773_49_26	32507	37459	-	I39.008
TC	HRGMv2_1773_49	HRGMv2_1773_49_27	37747	39291	+	4.A.1.1.16
CAZyme	HRGMv2_1773_49	HRGMv2_1773_49_28	39304	40671	+	GH4

Gene ID: HRGMv2_1773_49_23
Type: TC
Location: 27085 - 27714 (-)

Gene ID: HRGMv2_1773_49_24
Type: TC
Location: 27711 - 30089 (-)

Gene ID: HRGMv2_1773_49_25
Type: CAZyme
Location: 30178 - 32505 (-)

Gene ID: HRGMv2_1773_49_26
Type: peptidase
Location: 32507 - 37459 (-)

Gene ID: HRGMv2_1773_49_27
Type: TC
Location: 37747 - 39291 (+)

Gene ID: HRGMv2_1773_49_28
Type: CAZyme
Location: 39304 - 40671 (+)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1773_49_23	vegetarian > omnivore	1.23607	0.01969
HRGMv2_1773_49_24	vegetarian > omnivore	1.09604	0.01969
HRGMv2_1773_49_25	vegetarian > omnivore	1.46334	0.01969
HRGMv2_1773_49_27	vegetarian > omnivore	1.72560	0.01969
HRGMv2_1773_49_27	vegetarian > vegan	1.61407	0.03746