dbCAN Logo

Cluster: HRGMv2_1764_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1764_94 HRGMv2_1764_94_4 4100 5182 + 9.B.146.1.6
pfam HRGMv2_1764_94 HRGMv2_1764_94_5 5244 6557 + Mur_ligase_C | Mur_ligase_M | MurD-like_N
TC HRGMv2_1764_94 HRGMv2_1764_94_6 6573 7757 + 2.A.103.1.1
CAZyme HRGMv2_1764_94 HRGMv2_1764_94_7 7766 8818 + GT28
Gene ID: HRGMv2_1764_94_4
Type: TC
Location: 4100 - 5182 (+)
Gene ID: HRGMv2_1764_94_5
Type: pfam
Location: 5244 - 6557 (+)
Gene ID: HRGMv2_1764_94_6
Type: TC
Location: 6573 - 7757 (+)
Gene ID: HRGMv2_1764_94_7
Type: CAZyme
Location: 7766 - 8818 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1764_94_4 vegan > omnivore 1.03321 0.03728

🧭 Explore Read Mapping of CGC

← Back to Cluster List