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Cluster: HRGMv2_1764_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1764_64 HRGMv2_1764_64_2 146 1063 + GT8
TC HRGMv2_1764_64 HRGMv2_1764_64_3 1123 2169 - 3.A.1.20.2
pfam HRGMv2_1764_64 HRGMv2_1764_64_4 2318 4495 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
TC HRGMv2_1764_64 HRGMv2_1764_64_5 4605 4712 + 3.A.1.5.27
Gene ID: HRGMv2_1764_64_2
Type: CAZyme
Location: 146 - 1063 (+)
Gene ID: HRGMv2_1764_64_3
Type: TC
Location: 1123 - 2169 (-)
Gene ID: HRGMv2_1764_64_4
Type: pfam
Location: 2318 - 4495 (+)
Gene ID: HRGMv2_1764_64_5
Type: TC
Location: 4605 - 4712 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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