Cluster: HRGMv2_1764_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_1764
- CGC Family ID: CGCFAM_00036
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1764_211 | HRGMv2_1764_211_4 | 2691 | 4106 | - | 9.B.18.1.2 |
| CAZyme | HRGMv2_1764_211 | HRGMv2_1764_211_5 | 4117 | 4887 | - | GT111 |
| CAZyme | HRGMv2_1764_211 | HRGMv2_1764_211_6 | 4889 | 5815 | - | GT2 |
| pfam | HRGMv2_1764_211 | HRGMv2_1764_211_7 | 5890 | 7038 | - | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | HRGMv2_1764_211 | HRGMv2_1764_211_8 | 7055 | 8875 | - | GT111 | GT8 |
| NULL(UNKNOWN) | HRGMv2_1764_211 | HRGMv2_1764_211_9 | 8896 | 10320 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1764_211 | HRGMv2_1764_211_10 | 10323 | 11285 | - | GT2 |
Gene ID: HRGMv2_1764_211_4
Type: TC
Location: 2691 - 4106 (-)
Type: TC
Location: 2691 - 4106 (-)
Gene ID: HRGMv2_1764_211_5
Type: CAZyme
Location: 4117 - 4887 (-)
Type: CAZyme
Location: 4117 - 4887 (-)
Gene ID: HRGMv2_1764_211_6
Type: CAZyme
Location: 4889 - 5815 (-)
Type: CAZyme
Location: 4889 - 5815 (-)
Gene ID: HRGMv2_1764_211_7
Type: pfam
Location: 5890 - 7038 (-)
Type: pfam
Location: 5890 - 7038 (-)
Gene ID: HRGMv2_1764_211_8
Type: CAZyme
Location: 7055 - 8875 (-)
Type: CAZyme
Location: 7055 - 8875 (-)
Gene ID: HRGMv2_1764_211_9
Type:
Location: 8896 - 10320 (-)
Type:
Location: 8896 - 10320 (-)
Gene ID: HRGMv2_1764_211_10
Type: CAZyme
Location: 10323 - 11285 (-)
Type: CAZyme
Location: 10323 - 11285 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.