Cluster: HRGMv2_1764_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1764
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1764_183 | HRGMv2_1764_183_34 | 35804 | 36739 | - | GT2 |
| peptidase | HRGMv2_1764_183 | HRGMv2_1764_183_35 | 36862 | 38499 | - | C26.964 |
| pfam | HRGMv2_1764_183 | HRGMv2_1764_183_36 | 38761 | 40131 | + | Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2 |
| TC | HRGMv2_1764_183 | HRGMv2_1764_183_37 | 40248 | 40739 | + | 9.B.105.1.1 |
Gene ID: HRGMv2_1764_183_34
Type: CAZyme
Location: 35804 - 36739 (-)
Type: CAZyme
Location: 35804 - 36739 (-)
Gene ID: HRGMv2_1764_183_35
Type: peptidase
Location: 36862 - 38499 (-)
Type: peptidase
Location: 36862 - 38499 (-)
Gene ID: HRGMv2_1764_183_36
Type: pfam
Location: 38761 - 40131 (+)
Type: pfam
Location: 38761 - 40131 (+)
Gene ID: HRGMv2_1764_183_37
Type: TC
Location: 40248 - 40739 (+)
Type: TC
Location: 40248 - 40739 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1764_183_37 | vegan > omnivore | 1.24055 | 0.03728 |