Cluster: HRGMv2_1763_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1763
- CGC Family ID: CGCFAM_01610
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1763_1 | HRGMv2_1763_1_329 | 324051 | 324878 | + | CE1 |
| TC | HRGMv2_1763_1 | HRGMv2_1763_1_330 | 324931 | 328164 | - | 1.B.12.5.3 |
| pfam | HRGMv2_1763_1 | HRGMv2_1763_1_331 | 328370 | 329386 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_4 | KR | GDP_Man_Dehyd |
| TC | HRGMv2_1763_1 | HRGMv2_1763_1_332 | 329466 | 330740 | + | 2.A.1.25.3 |
Gene ID: HRGMv2_1763_1_329
Type: CAZyme
Location: 324051 - 324878 (+)
Type: CAZyme
Location: 324051 - 324878 (+)
Gene ID: HRGMv2_1763_1_330
Type: TC
Location: 324931 - 328164 (-)
Type: TC
Location: 324931 - 328164 (-)
Gene ID: HRGMv2_1763_1_331
Type: pfam
Location: 328370 - 329386 (+)
Type: pfam
Location: 328370 - 329386 (+)
Gene ID: HRGMv2_1763_1_332
Type: TC
Location: 329466 - 330740 (+)
Type: TC
Location: 329466 - 330740 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.