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Cluster: HRGMv2_1763_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1763_1 HRGMv2_1763_1_187 180152 180943 + 3.A.1.103.4
TC HRGMv2_1763_1 HRGMv2_1763_1_188 180943 181674 + 3.A.1.103.1
pfam HRGMv2_1763_1 HRGMv2_1763_1_189 181741 182742 + Acyl_transf_3
CAZyme HRGMv2_1763_1 HRGMv2_1763_1_190 182762 184624 + GT111 | GT8
pfam HRGMv2_1763_1 HRGMv2_1763_1_191 184641 185789 + Amino_oxidase | GLF | NAD_binding_8
CAZyme HRGMv2_1763_1 HRGMv2_1763_1_192 185864 186790 + GT2
CAZyme HRGMv2_1763_1 HRGMv2_1763_1_193 186792 187562 + GT111
TC HRGMv2_1763_1 HRGMv2_1763_1_194 187572 188987 + 9.B.18.1.2
Gene ID: HRGMv2_1763_1_187
Type: TC
Location: 180152 - 180943 (+)
Gene ID: HRGMv2_1763_1_188
Type: TC
Location: 180943 - 181674 (+)
Gene ID: HRGMv2_1763_1_189
Type: pfam
Location: 181741 - 182742 (+)
Gene ID: HRGMv2_1763_1_190
Type: CAZyme
Location: 182762 - 184624 (+)
Gene ID: HRGMv2_1763_1_191
Type: pfam
Location: 184641 - 185789 (+)
Gene ID: HRGMv2_1763_1_192
Type: CAZyme
Location: 185864 - 186790 (+)
Gene ID: HRGMv2_1763_1_193
Type: CAZyme
Location: 186792 - 187562 (+)
Gene ID: HRGMv2_1763_1_194
Type: TC
Location: 187572 - 188987 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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