Cluster: HRGMv2_1763_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1763
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1763_11 | HRGMv2_1763_11_16 | 17789 | 18733 | + | 2.A.16.1.2 |
| TF | HRGMv2_1763_11 | HRGMv2_1763_11_17 | 18808 | 19521 | - | GntR |
| CAZyme | HRGMv2_1763_11 | HRGMv2_1763_11_18 | 19717 | 23490 | + | GH77 | GT35 |
| pfam | HRGMv2_1763_11 | HRGMv2_1763_11_19 | 23500 | 24291 | + | Exo_endo_phos |
| TC | HRGMv2_1763_11 | HRGMv2_1763_11_20 | 24302 | 25966 | + | 4.A.1.1.11 |
Gene ID: HRGMv2_1763_11_16
Type: TC
Location: 17789 - 18733 (+)
Type: TC
Location: 17789 - 18733 (+)
Gene ID: HRGMv2_1763_11_17
Type: TF
Location: 18808 - 19521 (-)
Type: TF
Location: 18808 - 19521 (-)
Gene ID: HRGMv2_1763_11_18
Type: CAZyme
Location: 19717 - 23490 (+)
Type: CAZyme
Location: 19717 - 23490 (+)
Gene ID: HRGMv2_1763_11_19
Type: pfam
Location: 23500 - 24291 (+)
Type: pfam
Location: 23500 - 24291 (+)
Gene ID: HRGMv2_1763_11_20
Type: TC
Location: 24302 - 25966 (+)
Type: TC
Location: 24302 - 25966 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.