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Cluster: HRGMv2_1763_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1763_6 HRGMv2_1763_6_68 66137 67522 - 2.A.47.5.2
TC HRGMv2_1763_6 HRGMv2_1763_6_69 67678 68904 - 2.A.1.12.1
TF HRGMv2_1763_6 HRGMv2_1763_6_70 69078 69788 + GntR
pfam HRGMv2_1763_6 HRGMv2_1763_6_71 69778 70851 + GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3
CAZyme HRGMv2_1763_6 HRGMv2_1763_6_72 70862 71968 + GH177
pfam HRGMv2_1763_6 HRGMv2_1763_6_73 72060 73067 + FRG
pfam HRGMv2_1763_6 HRGMv2_1763_6_74 73119 73751 - PNPOx_N | PNP_phzG_C | Pyridox_oxase_2
TC HRGMv2_1763_6 HRGMv2_1763_6_75 73818 75464 - 3.A.1.5.27
TC HRGMv2_1763_6 HRGMv2_1763_6_76 75598 77007 - 2.A.1.3.51
Gene ID: HRGMv2_1763_6_68
Type: TC
Location: 66137 - 67522 (-)
Gene ID: HRGMv2_1763_6_69
Type: TC
Location: 67678 - 68904 (-)
Gene ID: HRGMv2_1763_6_70
Type: TF
Location: 69078 - 69788 (+)
Gene ID: HRGMv2_1763_6_71
Type: pfam
Location: 69778 - 70851 (+)
Gene ID: HRGMv2_1763_6_72
Type: CAZyme
Location: 70862 - 71968 (+)
Gene ID: HRGMv2_1763_6_73
Type: pfam
Location: 72060 - 73067 (+)
Gene ID: HRGMv2_1763_6_74
Type: pfam
Location: 73119 - 73751 (-)
Gene ID: HRGMv2_1763_6_75
Type: TC
Location: 73818 - 75464 (-)
Gene ID: HRGMv2_1763_6_76
Type: TC
Location: 75598 - 77007 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1763_6_74 vegetarian > omnivore 1.15267 0.01681
HRGMv2_1763_6_75 vegan > omnivore 1.10528 0.00749

🧭 Explore Read Mapping of CGC

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