Cluster: HRGMv2_1763_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1763
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1763_3 | HRGMv2_1763_3_18 | 16096 | 17178 | + | 9.B.146.1.6 |
| pfam | HRGMv2_1763_3 | HRGMv2_1763_3_19 | 17241 | 18554 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1763_3 | HRGMv2_1763_3_20 | 18570 | 19754 | + | 2.A.103.1.1 |
| CAZyme | HRGMv2_1763_3 | HRGMv2_1763_3_21 | 19763 | 20815 | + | GT28 |
Gene ID: HRGMv2_1763_3_18
Type: TC
Location: 16096 - 17178 (+)
Type: TC
Location: 16096 - 17178 (+)
Gene ID: HRGMv2_1763_3_19
Type: pfam
Location: 17241 - 18554 (+)
Type: pfam
Location: 17241 - 18554 (+)
Gene ID: HRGMv2_1763_3_20
Type: TC
Location: 18570 - 19754 (+)
Type: TC
Location: 18570 - 19754 (+)
Gene ID: HRGMv2_1763_3_21
Type: CAZyme
Location: 19763 - 20815 (+)
Type: CAZyme
Location: 19763 - 20815 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.