Cluster: HRGMv2_1762_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1762
- CGC Family ID: CGCFAM_01409
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1762_316 | HRGMv2_1762_316_1 | 2 | 829 | + | GT19 |
| pfam | HRGMv2_1762_316 | HRGMv2_1762_316_2 | 822 | 1424 | + | RNase_HII |
| TC | HRGMv2_1762_316 | HRGMv2_1762_316_3 | 1460 | 2866 | + | 2.A.47.4.8 |
| TC | HRGMv2_1762_316 | HRGMv2_1762_316_4 | 2811 | 3323 | + | 2.A.47.4.8 |
Gene ID: HRGMv2_1762_316_1
Type: CAZyme
Location: 2 - 829 (+)
Type: CAZyme
Location: 2 - 829 (+)
Gene ID: HRGMv2_1762_316_2
Type: pfam
Location: 822 - 1424 (+)
Type: pfam
Location: 822 - 1424 (+)
Gene ID: HRGMv2_1762_316_3
Type: TC
Location: 1460 - 2866 (+)
Type: TC
Location: 1460 - 2866 (+)
Gene ID: HRGMv2_1762_316_4
Type: TC
Location: 2811 - 3323 (+)
Type: TC
Location: 2811 - 3323 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.