Cluster: HRGMv2_1762_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1762
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1762_146 | HRGMv2_1762_146_1 | 2 | 910 | - | GT28 |
| TC | HRGMv2_1762_146 | HRGMv2_1762_146_2 | 919 | 2103 | - | 2.A.103.1.1 |
| pfam | HRGMv2_1762_146 | HRGMv2_1762_146_3 | 2119 | 3432 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1762_146 | HRGMv2_1762_146_4 | 3495 | 4577 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1762_146_1
Type: CAZyme
Location: 2 - 910 (-)
Type: CAZyme
Location: 2 - 910 (-)
Gene ID: HRGMv2_1762_146_2
Type: TC
Location: 919 - 2103 (-)
Type: TC
Location: 919 - 2103 (-)
Gene ID: HRGMv2_1762_146_3
Type: pfam
Location: 2119 - 3432 (-)
Type: pfam
Location: 2119 - 3432 (-)
Gene ID: HRGMv2_1762_146_4
Type: TC
Location: 3495 - 4577 (-)
Type: TC
Location: 3495 - 4577 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.