Cluster: HRGMv2_1762_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1762
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1762_24 | HRGMv2_1762_24_1 | 3 | 362 | - | 2.A.47.5.2 |
| TC | HRGMv2_1762_24 | HRGMv2_1762_24_2 | 518 | 1744 | - | 2.A.1.12.1 |
| TF | HRGMv2_1762_24 | HRGMv2_1762_24_3 | 2028 | 2645 | + | GntR |
| pfam | HRGMv2_1762_24 | HRGMv2_1762_24_4 | 2635 | 3708 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3 |
| CAZyme | HRGMv2_1762_24 | HRGMv2_1762_24_5 | 3719 | 4825 | + | GH177 |
Gene ID: HRGMv2_1762_24_1
Type: TC
Location: 3 - 362 (-)
Type: TC
Location: 3 - 362 (-)
Gene ID: HRGMv2_1762_24_2
Type: TC
Location: 518 - 1744 (-)
Type: TC
Location: 518 - 1744 (-)
Gene ID: HRGMv2_1762_24_3
Type: TF
Location: 2028 - 2645 (+)
Type: TF
Location: 2028 - 2645 (+)
Gene ID: HRGMv2_1762_24_4
Type: pfam
Location: 2635 - 3708 (+)
Type: pfam
Location: 2635 - 3708 (+)
Gene ID: HRGMv2_1762_24_5
Type: CAZyme
Location: 3719 - 4825 (+)
Type: CAZyme
Location: 3719 - 4825 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.