Cluster: HRGMv2_1762_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1762
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1762_16 | HRGMv2_1762_16_1 | 2 | 751 | + | GT35 |
| pfam | HRGMv2_1762_16 | HRGMv2_1762_16_2 | 762 | 1553 | + | Exo_endo_phos |
| TC | HRGMv2_1762_16 | HRGMv2_1762_16_3 | 1564 | 2685 | + | 4.A.1.1.11 |
Gene ID: HRGMv2_1762_16_1
Type: CAZyme
Location: 2 - 751 (+)
Type: CAZyme
Location: 2 - 751 (+)
Gene ID: HRGMv2_1762_16_2
Type: pfam
Location: 762 - 1553 (+)
Type: pfam
Location: 762 - 1553 (+)
Gene ID: HRGMv2_1762_16_3
Type: TC
Location: 1564 - 2685 (+)
Type: TC
Location: 1564 - 2685 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.