Cluster: HRGMv2_1749_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1749
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1749_2 | HRGMv2_1749_2_2 | 49 | 1389 | - | 3.A.1.122.8 |
| pfam | HRGMv2_1749_2 | HRGMv2_1749_2_3 | 1389 | 2783 | - | YHS | FtrD-like |
| TC | HRGMv2_1749_2 | HRGMv2_1749_2_4 | 2899 | 3420 | - | 2.A.108.2.10 |
| TC | HRGMv2_1749_2 | HRGMv2_1749_2_5 | 3449 | 5353 | - | 2.A.108.2.10 |
| CAZyme | HRGMv2_1749_2 | HRGMv2_1749_2_6 | 5572 | 7971 | - | GT51 |
Gene ID: HRGMv2_1749_2_2
Type: TC
Location: 49 - 1389 (-)
Type: TC
Location: 49 - 1389 (-)
Gene ID: HRGMv2_1749_2_3
Type: pfam
Location: 1389 - 2783 (-)
Type: pfam
Location: 1389 - 2783 (-)
Gene ID: HRGMv2_1749_2_4
Type: TC
Location: 2899 - 3420 (-)
Type: TC
Location: 2899 - 3420 (-)
Gene ID: HRGMv2_1749_2_5
Type: TC
Location: 3449 - 5353 (-)
Type: TC
Location: 3449 - 5353 (-)
Gene ID: HRGMv2_1749_2_6
Type: CAZyme
Location: 5572 - 7971 (-)
Type: CAZyme
Location: 5572 - 7971 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp959600045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1749_2_3 | vegetarian > vegan | 1.78102 | 0.02445 |