Cluster: HRGMv2_1749_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1749
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1749_12 | HRGMv2_1749_12_60 | 57866 | 59251 | - | 2.A.47.5.2 |
| TC | HRGMv2_1749_12 | HRGMv2_1749_12_61 | 59406 | 60632 | - | 2.A.1.12.1 |
| TF | HRGMv2_1749_12 | HRGMv2_1749_12_62 | 60807 | 61517 | + | GntR |
| pfam | HRGMv2_1749_12 | HRGMv2_1749_12_63 | 61507 | 62580 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3 |
| CAZyme | HRGMv2_1749_12 | HRGMv2_1749_12_64 | 62591 | 63697 | + | GH177 |
Gene ID: HRGMv2_1749_12_60
Type: TC
Location: 57866 - 59251 (-)
Type: TC
Location: 57866 - 59251 (-)
Gene ID: HRGMv2_1749_12_61
Type: TC
Location: 59406 - 60632 (-)
Type: TC
Location: 59406 - 60632 (-)
Gene ID: HRGMv2_1749_12_62
Type: TF
Location: 60807 - 61517 (+)
Type: TF
Location: 60807 - 61517 (+)
Gene ID: HRGMv2_1749_12_63
Type: pfam
Location: 61507 - 62580 (+)
Type: pfam
Location: 61507 - 62580 (+)
Gene ID: HRGMv2_1749_12_64
Type: CAZyme
Location: 62591 - 63697 (+)
Type: CAZyme
Location: 62591 - 63697 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp959600045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.