Cluster: HRGMv2_1749_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1749
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1749_11 | HRGMv2_1749_11_27 | 24167 | 25249 | + | 9.B.146.1.6 |
| pfam | HRGMv2_1749_11 | HRGMv2_1749_11_28 | 25312 | 26625 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1749_11 | HRGMv2_1749_11_29 | 26641 | 27825 | + | 2.A.103.1.1 |
| CAZyme | HRGMv2_1749_11 | HRGMv2_1749_11_30 | 27834 | 28886 | + | GT28 |
Gene ID: HRGMv2_1749_11_27
Type: TC
Location: 24167 - 25249 (+)
Type: TC
Location: 24167 - 25249 (+)
Gene ID: HRGMv2_1749_11_28
Type: pfam
Location: 25312 - 26625 (+)
Type: pfam
Location: 25312 - 26625 (+)
Gene ID: HRGMv2_1749_11_29
Type: TC
Location: 26641 - 27825 (+)
Type: TC
Location: 26641 - 27825 (+)
Gene ID: HRGMv2_1749_11_30
Type: CAZyme
Location: 27834 - 28886 (+)
Type: CAZyme
Location: 27834 - 28886 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp959600045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.