Cluster: HRGMv2_1749_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1749
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1749_7 | HRGMv2_1749_7_29 | 31837 | 32772 | - | GT2 |
| peptidase | HRGMv2_1749_7 | HRGMv2_1749_7_30 | 32895 | 34532 | - | C26.964 |
| pfam | HRGMv2_1749_7 | HRGMv2_1749_7_31 | 34792 | 36162 | + | Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2 | Hexapep_2 |
| TC | HRGMv2_1749_7 | HRGMv2_1749_7_32 | 36279 | 36770 | + | 9.B.105.1.1 |
Gene ID: HRGMv2_1749_7_29
Type: CAZyme
Location: 31837 - 32772 (-)
Type: CAZyme
Location: 31837 - 32772 (-)
Gene ID: HRGMv2_1749_7_30
Type: peptidase
Location: 32895 - 34532 (-)
Type: peptidase
Location: 32895 - 34532 (-)
Gene ID: HRGMv2_1749_7_31
Type: pfam
Location: 34792 - 36162 (+)
Type: pfam
Location: 34792 - 36162 (+)
Gene ID: HRGMv2_1749_7_32
Type: TC
Location: 36279 - 36770 (+)
Type: TC
Location: 36279 - 36770 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp959600045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1749_7_32 | vegan > omnivore | 1.16990 | 0.01786 |
| HRGMv2_1749_7_32 | vegetarian > omnivore | 1.08243 | 0.01164 |