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Cluster: HRGMv2_1748_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1748_36 HRGMv2_1748_36_2 1884 2753 + GT101
NULL(UNKNOWN) HRGMv2_1748_36 HRGMv2_1748_36_3 2994 3092 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_1748_36 HRGMv2_1748_36_4 3243 4238 - PfkB
TC HRGMv2_1748_36 HRGMv2_1748_36_5 4263 5531 - 2.A.56.1.5
pfam HRGMv2_1748_36 HRGMv2_1748_36_6 5537 6025 - DctQ
TC HRGMv2_1748_36 HRGMv2_1748_36_7 6085 7089 - 2.A.56.1.9
pfam HRGMv2_1748_36 HRGMv2_1748_36_8 7101 7910 - DeoC
TF HRGMv2_1748_36 HRGMv2_1748_36_9 8095 8853 + HTH_DeoR
TC HRGMv2_1748_36 HRGMv2_1748_36_10 9835 10827 + 2.A.56.1.4
pfam HRGMv2_1748_36 HRGMv2_1748_36_11 10908 11402 + DctQ
TC HRGMv2_1748_36 HRGMv2_1748_36_12 11450 12742 + 2.A.56.1.4
Gene ID: HRGMv2_1748_36_2
Type: CAZyme
Location: 1884 - 2753 (+)
Gene ID: HRGMv2_1748_36_3
Type:
Location: 2994 - 3092 (+)
Gene ID: HRGMv2_1748_36_4
Type: STP
Location: 3243 - 4238 (-)
Gene ID: HRGMv2_1748_36_5
Type: TC
Location: 4263 - 5531 (-)
Gene ID: HRGMv2_1748_36_6
Type: pfam
Location: 5537 - 6025 (-)
Gene ID: HRGMv2_1748_36_7
Type: TC
Location: 6085 - 7089 (-)
Gene ID: HRGMv2_1748_36_8
Type: pfam
Location: 7101 - 7910 (-)
Gene ID: HRGMv2_1748_36_9
Type: TF
Location: 8095 - 8853 (+)
Gene ID: HRGMv2_1748_36_10
Type: TC
Location: 9835 - 10827 (+)
Gene ID: HRGMv2_1748_36_11
Type: pfam
Location: 10908 - 11402 (+)
Gene ID: HRGMv2_1748_36_12
Type: TC
Location: 11450 - 12742 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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