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Cluster: HRGMv2_1748_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1748_33 HRGMv2_1748_33_3 2541 3521 + 2.A.56.1.9
pfam HRGMv2_1748_33 HRGMv2_1748_33_4 3532 4035 + DctQ
TC HRGMv2_1748_33 HRGMv2_1748_33_5 4039 5319 + 2.A.56.1.2
pfam HRGMv2_1748_33 HRGMv2_1748_33_6 5339 6103 + adh_short | KR | adh_short_C2
CAZyme HRGMv2_1748_33 HRGMv2_1748_33_7 6160 8295 - GH13_11
CAZyme HRGMv2_1748_33 HRGMv2_1748_33_8 8320 10704 - CBM48 | GH13_9
CAZyme HRGMv2_1748_33 HRGMv2_1748_33_9 10722 12917 - GH77
Gene ID: HRGMv2_1748_33_3
Type: TC
Location: 2541 - 3521 (+)
Gene ID: HRGMv2_1748_33_4
Type: pfam
Location: 3532 - 4035 (+)
Gene ID: HRGMv2_1748_33_5
Type: TC
Location: 4039 - 5319 (+)
Gene ID: HRGMv2_1748_33_6
Type: pfam
Location: 5339 - 6103 (+)
Gene ID: HRGMv2_1748_33_7
Type: CAZyme
Location: 6160 - 8295 (-)
Gene ID: HRGMv2_1748_33_8
Type: CAZyme
Location: 8320 - 10704 (-)
Gene ID: HRGMv2_1748_33_9
Type: CAZyme
Location: 10722 - 12917 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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