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Cluster: HRGMv2_1748_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1748_21 HRGMv2_1748_21_9 8115 9644 + 3.D.2.1.1
TC HRGMv2_1748_21 HRGMv2_1748_21_10 9665 11047 + 3.D.2.1.1
TC HRGMv2_1748_21 HRGMv2_1748_21_11 11133 11657 - 4.A.3.2.5
TC HRGMv2_1748_21 HRGMv2_1748_21_12 11708 13369 - 8.A.7.1.4
TC HRGMv2_1748_21 HRGMv2_1748_21_13 13373 14137 - 2.A.121.1.1
pfam HRGMv2_1748_21 HRGMv2_1748_21_14 14241 15005 + ZipA_C
pfam HRGMv2_1748_21 HRGMv2_1748_21_15 15008 17098 + BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | HHH_2 | HHH_5
CAZyme HRGMv2_1748_21 HRGMv2_1748_21_16 17142 18161 - GH23
Gene ID: HRGMv2_1748_21_9
Type: TC
Location: 8115 - 9644 (+)
Gene ID: HRGMv2_1748_21_10
Type: TC
Location: 9665 - 11047 (+)
Gene ID: HRGMv2_1748_21_11
Type: TC
Location: 11133 - 11657 (-)
Gene ID: HRGMv2_1748_21_12
Type: TC
Location: 11708 - 13369 (-)
Gene ID: HRGMv2_1748_21_13
Type: TC
Location: 13373 - 14137 (-)
Gene ID: HRGMv2_1748_21_14
Type: pfam
Location: 14241 - 15005 (+)
Gene ID: HRGMv2_1748_21_15
Type: pfam
Location: 15008 - 17098 (+)
Gene ID: HRGMv2_1748_21_16
Type: CAZyme
Location: 17142 - 18161 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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