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Cluster: HRGMv2_1738_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1738_39 HRGMv2_1738_39_3 2031 2909 + 3.A.1.7.5
TC HRGMv2_1738_39 HRGMv2_1738_39_4 2906 3790 + 3.A.1.7.3
TC HRGMv2_1738_39 HRGMv2_1738_39_5 3797 4585 + 3.A.1.7.5
NULL(UNKNOWN) HRGMv2_1738_39 HRGMv2_1738_39_6 4854 5243 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1738_39 HRGMv2_1738_39_7 5843 6310 + GH24
TC HRGMv2_1738_39 HRGMv2_1738_39_8 6307 6699 + 1.E.54.4.6
Gene ID: HRGMv2_1738_39_3
Type: TC
Location: 2031 - 2909 (+)
Gene ID: HRGMv2_1738_39_4
Type: TC
Location: 2906 - 3790 (+)
Gene ID: HRGMv2_1738_39_5
Type: TC
Location: 3797 - 4585 (+)
Gene ID: HRGMv2_1738_39_6
Type:
Location: 4854 - 5243 (+)
Gene ID: HRGMv2_1738_39_7
Type: CAZyme
Location: 5843 - 6310 (+)
Gene ID: HRGMv2_1738_39_8
Type: TC
Location: 6307 - 6699 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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