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Cluster: HRGMv2_1738_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1738_38 HRGMv2_1738_38_1 441 1658 + 2.A.1.2.97
TC HRGMv2_1738_38 HRGMv2_1738_38_2 1888 3309 - 3.D.7.2.2
TC HRGMv2_1738_38 HRGMv2_1738_38_3 3485 4474 - 3.D.7.2.1
TF HRGMv2_1738_38 HRGMv2_1738_38_4 4885 5322 + FUR
pfam HRGMv2_1738_38 HRGMv2_1738_38_5 5357 5920 + Ferritin | Rubrerythrin | RUBY_RBDX
CAZyme HRGMv2_1738_38 HRGMv2_1738_38_6 6622 7674 - GT9
TC HRGMv2_1738_38 HRGMv2_1738_38_7 7698 8471 - 1.C.109.1.4
TC HRGMv2_1738_38 HRGMv2_1738_38_8 8841 10079 - 2.A.23.1.2
Gene ID: HRGMv2_1738_38_1
Type: TC
Location: 441 - 1658 (+)
Gene ID: HRGMv2_1738_38_2
Type: TC
Location: 1888 - 3309 (-)
Gene ID: HRGMv2_1738_38_3
Type: TC
Location: 3485 - 4474 (-)
Gene ID: HRGMv2_1738_38_4
Type: TF
Location: 4885 - 5322 (+)
Gene ID: HRGMv2_1738_38_5
Type: pfam
Location: 5357 - 5920 (+)
Gene ID: HRGMv2_1738_38_6
Type: CAZyme
Location: 6622 - 7674 (-)
Gene ID: HRGMv2_1738_38_7
Type: TC
Location: 7698 - 8471 (-)
Gene ID: HRGMv2_1738_38_8
Type: TC
Location: 8841 - 10079 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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