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Cluster: HRGMv2_1738_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1738_31 HRGMv2_1738_31_34 21025 22728 + GH144
STP HRGMv2_1738_31 HRGMv2_1738_31_35 23173 23613 + Cyanate_lyase
NULL(UNKNOWN) HRGMv2_1738_31 HRGMv2_1738_31_36 23662 23853 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1738_31 HRGMv2_1738_31_37 23850 25025 + 3.A.1.16.2
TC HRGMv2_1738_31 HRGMv2_1738_31_38 25085 25891 + 3.A.1.16.2
TC HRGMv2_1738_31 HRGMv2_1738_31_39 25916 26710 + 3.A.1.16.3
Gene ID: HRGMv2_1738_31_34
Type: CAZyme
Location: 21025 - 22728 (+)
Gene ID: HRGMv2_1738_31_35
Type: STP
Location: 23173 - 23613 (+)
Gene ID: HRGMv2_1738_31_36
Type:
Location: 23662 - 23853 (+)
Gene ID: HRGMv2_1738_31_37
Type: TC
Location: 23850 - 25025 (+)
Gene ID: HRGMv2_1738_31_38
Type: TC
Location: 25085 - 25891 (+)
Gene ID: HRGMv2_1738_31_39
Type: TC
Location: 25916 - 26710 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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