dbCAN Logo

Cluster: HRGMv2_1736_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1736_13 HRGMv2_1736_13_11 11191 13176 - GT4
TC HRGMv2_1736_13 HRGMv2_1736_13_12 13238 14428 - 3.A.1.122.12
CAZyme HRGMv2_1736_13 HRGMv2_1736_13_13 14690 15877 - GT21
NULL(UNKNOWN) HRGMv2_1736_13 HRGMv2_1736_13_14 16018 16503 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1736_13 HRGMv2_1736_13_15 16689 17780 - GT4
NULL(UNKNOWN) HRGMv2_1736_13 HRGMv2_1736_13_16 18010 19035 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1736_13 HRGMv2_1736_13_17 19035 19802 + Phosphodiest
TC HRGMv2_1736_13 HRGMv2_1736_13_18 19783 20694 + 2.A.7.28.11
Gene ID: HRGMv2_1736_13_11
Type: CAZyme
Location: 11191 - 13176 (-)
Gene ID: HRGMv2_1736_13_12
Type: TC
Location: 13238 - 14428 (-)
Gene ID: HRGMv2_1736_13_13
Type: CAZyme
Location: 14690 - 15877 (-)
Gene ID: HRGMv2_1736_13_14
Type:
Location: 16018 - 16503 (-)
Gene ID: HRGMv2_1736_13_15
Type: CAZyme
Location: 16689 - 17780 (-)
Gene ID: HRGMv2_1736_13_16
Type:
Location: 18010 - 19035 (+)
Gene ID: HRGMv2_1736_13_17
Type: pfam
Location: 19035 - 19802 (+)
Gene ID: HRGMv2_1736_13_18
Type: TC
Location: 19783 - 20694 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List