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Cluster: HRGMv2_1736_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1736_10 HRGMv2_1736_10_55 62770 63882 - GT92
pfam HRGMv2_1736_10 HRGMv2_1736_10_56 63990 64634 - Hydrolase | HAD | Hydrolase_like | HAD_2
CAZyme HRGMv2_1736_10 HRGMv2_1736_10_57 64671 65726 - CE4
TC HRGMv2_1736_10 HRGMv2_1736_10_58 66063 67214 + 8.A.59.4.1
NULL(UNKNOWN) HRGMv2_1736_10 HRGMv2_1736_10_59 67455 67676 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1736_10 HRGMv2_1736_10_60 67816 70356 - GT4
TC HRGMv2_1736_10 HRGMv2_1736_10_61 70792 71997 - 2.A.1.36.3
pfam HRGMv2_1736_10 HRGMv2_1736_10_62 72079 72831 - adh_short | KR | adh_short_C2
TF HRGMv2_1736_10 HRGMv2_1736_10_63 72930 73877 + HTH_1
TC HRGMv2_1736_10 HRGMv2_1736_10_64 74052 75314 - 9.B.34.1.3
TC HRGMv2_1736_10 HRGMv2_1736_10_65 75991 77250 - 2.A.40.1.4
STP HRGMv2_1736_10 HRGMv2_1736_10_66 77262 77888 - Pribosyltran
STP HRGMv2_1736_10 HRGMv2_1736_10_67 78103 79200 + Fer4 | Fer4
TC HRGMv2_1736_10 HRGMv2_1736_10_68 79951 80955 + 2.A.56.1.6
TC HRGMv2_1736_10 HRGMv2_1736_10_69 81157 81717 + 2.A.56.1.2
TC HRGMv2_1736_10 HRGMv2_1736_10_70 81727 83016 + 2.A.56.1.2
pfam HRGMv2_1736_10 HRGMv2_1736_10_71 83136 84191 - ADH_zinc_N | ADH_N | ADH_zinc_N_2
TC HRGMv2_1736_10 HRGMv2_1736_10_72 84701 86509 + 1.B.52.2.1
Gene ID: HRGMv2_1736_10_55
Type: CAZyme
Location: 62770 - 63882 (-)
Gene ID: HRGMv2_1736_10_56
Type: pfam
Location: 63990 - 64634 (-)
Gene ID: HRGMv2_1736_10_57
Type: CAZyme
Location: 64671 - 65726 (-)
Gene ID: HRGMv2_1736_10_58
Type: TC
Location: 66063 - 67214 (+)
Gene ID: HRGMv2_1736_10_59
Type:
Location: 67455 - 67676 (+)
Gene ID: HRGMv2_1736_10_60
Type: CAZyme
Location: 67816 - 70356 (-)
Gene ID: HRGMv2_1736_10_61
Type: TC
Location: 70792 - 71997 (-)
Gene ID: HRGMv2_1736_10_62
Type: pfam
Location: 72079 - 72831 (-)
Gene ID: HRGMv2_1736_10_63
Type: TF
Location: 72930 - 73877 (+)
Gene ID: HRGMv2_1736_10_64
Type: TC
Location: 74052 - 75314 (-)
Gene ID: HRGMv2_1736_10_65
Type: TC
Location: 75991 - 77250 (-)
Gene ID: HRGMv2_1736_10_66
Type: STP
Location: 77262 - 77888 (-)
Gene ID: HRGMv2_1736_10_67
Type: STP
Location: 78103 - 79200 (+)
Gene ID: HRGMv2_1736_10_68
Type: TC
Location: 79951 - 80955 (+)
Gene ID: HRGMv2_1736_10_69
Type: TC
Location: 81157 - 81717 (+)
Gene ID: HRGMv2_1736_10_70
Type: TC
Location: 81727 - 83016 (+)
Gene ID: HRGMv2_1736_10_71
Type: pfam
Location: 83136 - 84191 (-)
Gene ID: HRGMv2_1736_10_72
Type: TC
Location: 84701 - 86509 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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