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Cluster: HRGMv2_1736_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1736_8 HRGMv2_1736_8_32 40483 44739 - GT3 | GT35
CAZyme HRGMv2_1736_8 HRGMv2_1736_8_33 44769 46025 - GH57
CAZyme HRGMv2_1736_8 HRGMv2_1736_8_34 46025 47374 - GT4
CAZyme HRGMv2_1736_8 HRGMv2_1736_8_35 47385 49553 - GH133
TC HRGMv2_1736_8 HRGMv2_1736_8_36 50197 51318 + 3.A.1.4.8
TC HRGMv2_1736_8 HRGMv2_1736_8_37 51476 52381 + 3.A.1.4.1
TC HRGMv2_1736_8 HRGMv2_1736_8_38 52378 53349 + 3.A.1.4.8
TC HRGMv2_1736_8 HRGMv2_1736_8_39 53346 54116 + 3.A.1.4.10
TC HRGMv2_1736_8 HRGMv2_1736_8_40 54120 54830 + 3.A.1.4.10
Gene ID: HRGMv2_1736_8_32
Type: CAZyme
Location: 40483 - 44739 (-)
Gene ID: HRGMv2_1736_8_33
Type: CAZyme
Location: 44769 - 46025 (-)
Gene ID: HRGMv2_1736_8_34
Type: CAZyme
Location: 46025 - 47374 (-)
Gene ID: HRGMv2_1736_8_35
Type: CAZyme
Location: 47385 - 49553 (-)
Gene ID: HRGMv2_1736_8_36
Type: TC
Location: 50197 - 51318 (+)
Gene ID: HRGMv2_1736_8_37
Type: TC
Location: 51476 - 52381 (+)
Gene ID: HRGMv2_1736_8_38
Type: TC
Location: 52378 - 53349 (+)
Gene ID: HRGMv2_1736_8_39
Type: TC
Location: 53346 - 54116 (+)
Gene ID: HRGMv2_1736_8_40
Type: TC
Location: 54120 - 54830 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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