dbCAN Logo

Cluster: HRGMv2_1732_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1732_7 HRGMv2_1732_7_53 66473 68626 + 3.A.3.32.3
pfam HRGMv2_1732_7 HRGMv2_1732_7_54 68604 68891 + HMA_2
CAZyme HRGMv2_1732_7 HRGMv2_1732_7_55 69041 70195 - GT9
TC HRGMv2_1732_7 HRGMv2_1732_7_56 70195 71595 - 9.B.18.1.2
TC HRGMv2_1732_7 HRGMv2_1732_7_57 71964 72707 + 3.A.1.3.10
TC HRGMv2_1732_7 HRGMv2_1732_7_58 72798 73490 + 3.A.1.3.23
TC HRGMv2_1732_7 HRGMv2_1732_7_59 73494 74252 + 3.A.1.3.24
TC HRGMv2_1732_7 HRGMv2_1732_7_60 74254 74922 + 3.A.1.3.2
TC HRGMv2_1732_7 HRGMv2_1732_7_61 75153 78251 + 9.B.34.1.3
Gene ID: HRGMv2_1732_7_53
Type: TC
Location: 66473 - 68626 (+)
Gene ID: HRGMv2_1732_7_54
Type: pfam
Location: 68604 - 68891 (+)
Gene ID: HRGMv2_1732_7_55
Type: CAZyme
Location: 69041 - 70195 (-)
Gene ID: HRGMv2_1732_7_56
Type: TC
Location: 70195 - 71595 (-)
Gene ID: HRGMv2_1732_7_57
Type: TC
Location: 71964 - 72707 (+)
Gene ID: HRGMv2_1732_7_58
Type: TC
Location: 72798 - 73490 (+)
Gene ID: HRGMv2_1732_7_59
Type: TC
Location: 73494 - 74252 (+)
Gene ID: HRGMv2_1732_7_60
Type: TC
Location: 74254 - 74922 (+)
Gene ID: HRGMv2_1732_7_61
Type: TC
Location: 75153 - 78251 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List