dbCAN Logo

Cluster: HRGMv2_1732_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1732_4 HRGMv2_1732_4_57 68114 70258 - 1.B.33.2.4
NULL(UNKNOWN) HRGMv2_1732_4 HRGMv2_1732_4_58 70313 70804 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1732_4 HRGMv2_1732_4_59 71024 71881 + HK
CAZyme HRGMv2_1732_4 HRGMv2_1732_4_60 72477 76742 - GT3 | GT35
CAZyme HRGMv2_1732_4 HRGMv2_1732_4_61 76790 78235 - GH57
CAZyme HRGMv2_1732_4 HRGMv2_1732_4_62 78235 79605 - GT4
CAZyme HRGMv2_1732_4 HRGMv2_1732_4_63 79694 81853 - GH133
TC HRGMv2_1732_4 HRGMv2_1732_4_64 82432 83553 + 3.A.1.4.8
TC HRGMv2_1732_4 HRGMv2_1732_4_65 83808 84713 + 3.A.1.4.1
TC HRGMv2_1732_4 HRGMv2_1732_4_66 84710 85720 + 3.A.1.4.8
TC HRGMv2_1732_4 HRGMv2_1732_4_67 85717 86487 + 3.A.1.4.10
TC HRGMv2_1732_4 HRGMv2_1732_4_68 86491 87201 + 3.A.1.4.10
NULL(UNKNOWN) HRGMv2_1732_4 HRGMv2_1732_4_69 87522 88598 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1732_4 HRGMv2_1732_4_70 88825 89658 - 9.B.99.1.2
Gene ID: HRGMv2_1732_4_57
Type: TC
Location: 68114 - 70258 (-)
Gene ID: HRGMv2_1732_4_58
Type:
Location: 70313 - 70804 (-)
Gene ID: HRGMv2_1732_4_59
Type: pfam
Location: 71024 - 71881 (+)
Gene ID: HRGMv2_1732_4_60
Type: CAZyme
Location: 72477 - 76742 (-)
Gene ID: HRGMv2_1732_4_61
Type: CAZyme
Location: 76790 - 78235 (-)
Gene ID: HRGMv2_1732_4_62
Type: CAZyme
Location: 78235 - 79605 (-)
Gene ID: HRGMv2_1732_4_63
Type: CAZyme
Location: 79694 - 81853 (-)
Gene ID: HRGMv2_1732_4_64
Type: TC
Location: 82432 - 83553 (+)
Gene ID: HRGMv2_1732_4_65
Type: TC
Location: 83808 - 84713 (+)
Gene ID: HRGMv2_1732_4_66
Type: TC
Location: 84710 - 85720 (+)
Gene ID: HRGMv2_1732_4_67
Type: TC
Location: 85717 - 86487 (+)
Gene ID: HRGMv2_1732_4_68
Type: TC
Location: 86491 - 87201 (+)
Gene ID: HRGMv2_1732_4_69
Type:
Location: 87522 - 88598 (-)
Gene ID: HRGMv2_1732_4_70
Type: TC
Location: 88825 - 89658 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1732_4_68 vegetarian > omnivore 1.09180 0.02677

🧭 Explore Read Mapping of CGC

← Back to Cluster List